BLOG - Barcoding with LOGic formulas
BLOG is a application devoted to the automatic classification of animal species through the analysis of a small portion of mitochondrial DNA, DNA Barcode. The application is described in detail in Bertolazzi, Felici, Weitschek Learning to classify species with barcodes. To run BLOG, you must provide a training set of barcodes (650 sites with A, C, G, T) and the species to which each barcode belongs. Then, logic formulas are extracted from the training data and a test set of one of more barcode is classified according to these formulas.
Command Line Versions
| BLOG2-LINUX-32.zip |
| BLOG2-LINUX-64.zip |
| BLOG2-SOURCE.zip |
| BLOG2-WINDOWS.zip |
Offline Graphic User Interface Version
| BLOG2-GUI-LINUX-32.zip |
| BLOG2-GUI-LINUX-64.zip |
| BLOG2-GUI-WINDOWS.exe |
Sample datasets
| Cypraeidae.zip |
| Drosophila.zip |
| Inga.zip |
| Simulated.zip |
| aQuickTest.zip |
| algae.zip |
| bats.zip |
| birds.zip |
| fishes.zip |
| fungi.zip |
